ALE

ExODT is a modification of the ODT algorithm which explicitely accounts for the contribution of extinct or unsampled species to extant genomes via lateral gene transfer. It is describes here (SYST BIOL, 2013).


This section’s articles

Thursday 11 April 2013
by  daubin

ALE

Amalgamated likelihood estimation (ALE) is a probabilistic approach to exhaustively explore all reconciled gene trees that can be amalgamated as a combination of clades observed in a sample of gene trees. We implement the ALE approach in the context of a reconciliation model (cf. (...)